Fitness data for HSERO_RS10950 in Herbaspirillum seropedicae SmR1

RNA methyltransferase
SEED: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
KEGG: RNA methyltransferase, TrmH family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
control NoPredeControl -0.9 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -3.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -2.4 compare
carbon source Carbon source Phenylacetic 5 mM -0.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -3.4 compare
carbon source D-Lactate (C) -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.5 compare
carbon source L-Rhamnose (C) -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.6 -3.0 compare
carbon source L-Fucose (C) -0.6 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.1 compare
carbon source D-Galacturonic Acid (C) -0.5 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.2 compare
carbon source D-Mannose (C) -0.5 -1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare