Fitness data for HSERO_RS10675 in Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Proline (C) -0.6 -2.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.6 +3.6 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.6 +4.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.6 +2.9 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.7 +3.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.8 +5.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.9 +4.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +1.1 +6.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +1.1 +6.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +1.1 +7.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.1 +3.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +2.3 +17.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +2.9 +19.4 compare