Fitness data for HSERO_RS10665 in Herbaspirillum seropedicae SmR1

coproporphyrinogen III oxidase
SEED: Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
KEGG: oxygen-independent coproporphyrinogen III oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.5 compare
carbon source D-Gluconic Acid (C) +0.8 +2.0 compare
carbon source D,L-Lactate (C) +0.8 +2.5 compare
carbon source D-Galactose (C) +0.8 +2.4 compare
carbon source D-Sorbitol (C) +0.8 +2.3 compare
carbon source m-Inositol (C) +0.8 +3.1 compare
stress Lomefloxacin 0.012 mM +0.8 +2.1 compare
carbon source D-Lactate (C) +0.8 +2.8 compare
carbon source D-Xylose (C) +0.9 +2.7 compare
carbon source Xylitol (C) +0.9 +2.2 compare
carbon source m-Inositol (C) +1.0 +3.2 compare
stress Cisplatin 0.003 mg/ml +1.0 +3.9 compare
stress Fusidic 0.025 mg/ml +1.0 +3.1 compare
carbon source L-Lactate (C) +1.1 +3.2 compare
stress Sisomicin 0.125 mg/ml +1.2 +3.3 compare
carbon source Glycerol (C) +1.3 +3.5 compare
stress Thallium(I) acetate 0.001 mg/ml +1.4 +6.5 compare