Fitness data for HSERO_RS10630 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -1.0 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.9 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -2.1 compare
vitamin With vitamins t1 -0.7 -2.2 compare
control NoPredeControl -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.2 compare
vitamin No vitamins t1 -0.5 -2.0 compare
stress Chloride stress -0.5 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.2 compare
carbon source D-Galactose (C) -0.5 -1.1 compare
carbon source L-Fucose (C) +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.5 compare
carbon source L-Arabinose (C) +0.5 +1.3 compare
carbon source D-Galactose (C) +0.6 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.3 +1.3 compare