Fitness data for HSERO_RS10550 in Herbaspirillum seropedicae SmR1

histidine kinase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -1.0 -6.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.7 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.5 -3.4 compare
vitamin No vitamins t2 -0.5 -3.0 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.4 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -3.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -2.5 compare
vitamin With vitamins t2 -0.4 -2.1 compare
carbon source L-Proline (C) +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
carbon source L-Proline (C) +0.5 +2.2 compare
carbon source L-Rhamnose (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +0.8 compare
carbon source D-Glucose (C) +0.5 +2.9 compare
carbon source L-Fucose (C) +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.3 compare