Fitness data for HSERO_RS10235 in Herbaspirillum seropedicae SmR1

RND transporter
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.4 compare
stress Cobalt chloride 0.2 mM -0.6 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.9 compare
stress Lomefloxacin 0.012 mM -0.5 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.5 compare
stress Nickel (II) chloride 0.6 mM -0.5 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
carbon source D,L-Malic Acid (C) +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.1 compare
carbon source L-Arabinose (C) +0.5 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.5 compare
carbon source L-Rhamnose (C) +0.6 +2.4 compare
carbon source D-Gluconic Acid (C) +0.6 +2.0 compare
carbon source L-Malic (C) +0.7 +2.8 compare
carbon source L-Fucose (C) +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.7 compare