Fitness data for HSERO_RS10070 in Herbaspirillum seropedicae SmR1

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source L-Proline (C) -1.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.1 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -1.2 compare
carbon source L-Fucose (C) -0.9 -1.7 compare
carbon source L-Glutamine (C) -0.9 -1.2 compare
carbon source L-Lactate (C) +0.9 +1.5 compare
carbon source D-Ribose (C) +0.9 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.9 +1.5 compare
nutrient L-Serine +1.0 +2.4 compare
carbon source Xylitol (C) +1.0 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.0 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +1.0 +2.0 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.8 +1.6 compare