Fitness data for HSERO_RS09635 in Herbaspirillum seropedicae SmR1

transcriptional regulator
SEED: Sigma factor RpoE negative regulatory protein RseB precursor
KEGG: sigma-E factor negative regulatory protein RseB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.1 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.3 compare
control NoPredeControl -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.5 compare
stress nitrite 20 mM -0.7 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.7 -2.3 compare
carbon source m-Inositol (C) -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -1.6 compare
plant Control soil assay; outgrowth in LB -0.5 -1.8 compare
carbon source D-Lactate (C) +0.5 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +0.6 compare
carbon source L-Arabinose (C) +0.6 +1.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.6 +2.4 compare
carbon source Xylitol (C) +0.6 +1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.7 +1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.8 compare
carbon source L-Fucose (C) +0.8 +2.5 compare