Fitness data for HSERO_RS09565 in Herbaspirillum seropedicae SmR1

nitrite efflux transporter, HPP family (from data)
Original annotation: membrane protein
SEED: Probable transmembrane protein
KEGG: CBS domain-containing membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress nitrite 20 mM -1.5 -6.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.6 compare
nitrogen source nitrate (N); low aeration -0.6 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.3 compare
carbon source L-Arabinose (C) -0.5 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.8 compare
vitamin No vitamins t2 -0.5 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.6 compare
carbon source D-Ribose (C) -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.4 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.3 compare
nitrogen source nitrate (N); low aeration -0.4 -2.2 compare
carbon source D-Glucose (C) -0.4 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.6 compare
stress Sisomicin 0.125 mg/ml +0.4 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.4 compare