Fitness data for HSERO_RS09550 in Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
micoeukaryotes C.elegans, mixed culture-1 -0.7 -3.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.9 compare
control NoPredeControl -0.6 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.4 compare
stress sodium fluoride 100 mM -0.5 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.4 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -2.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.4 -2.4 compare
stress Fusidic 0.025 mg/ml -0.4 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.2 compare
control NoPredeControl +0.4 +1.1 compare
carbon source D-Gluconic Acid (C) +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.7 compare