Fitness data for HSERO_RS09480 in Herbaspirillum seropedicae SmR1

radical SAM protein
SEED: Radical SAM domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Rhamnose (C) -1.3 -2.5 compare
carbon source D-Xylose (C) -0.7 -2.4 compare
carbon source D-Lactate (C) -0.7 -1.7 compare
micoeukaryotes C.elegans, mixed culture-1 -0.7 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.4 compare
carbon source L-Rhamnose (C) -0.6 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.6 +2.3 compare
carbon source m-Inositol (C) +0.6 +1.6 compare
carbon source Glycerol (C) +0.6 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.9 +3.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.9 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +1.2 compare