Fitness data for HSERO_RS09290 in Herbaspirillum seropedicae SmR1

ribonuclease R
SEED: 3'-to-5' exoribonuclease RNase R
KEGG: ribonuclease R

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -4.5 -5.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -4.2 -5.0 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -3.1 -6.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 -4.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.6 -3.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.6 -5.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.5 -3.5 compare
stress sodium fluoride 100 mM -2.5 -4.0 compare
carbon source L-Malic (C) -2.4 -4.9 compare
plant Control soil assay; outgrowth in LB -2.3 -3.9 compare
stress Cisplatin 0.003 mg/ml -2.0 -4.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.0 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.9 -4.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -4.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.8 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.8 -3.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -2.8 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.7 -6.0 compare