Fitness data for HSERO_RS09235 in Herbaspirillum seropedicae SmR1

MarR family transcriptional regulator
SEED: Organic hydroperoxide resistance transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
carbon source L-Rhamnose (C) -3.1 -1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.0 -1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -2.6 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.4 -1.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -2.4 -2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.4 -1.1 compare
vitamin No vitamins t2 -2.3 -2.1 compare
carbon source D-Glucose-6-Phosphate (C) -2.3 -1.8 compare
carbon source L-Proline (C) -2.1 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1 -1.2 compare
nutrient L-Histidine -1.8 -2.0 compare
stress Fusidic 0.025 mg/ml -1.8 -1.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.8 -1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.8 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.7 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -0.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -1.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.7 +2.4 compare
supernatant control Vogels_fungal_media 0.1X +1.7 +2.4 compare