Fitness data for HSERO_RS09135 in Herbaspirillum seropedicae SmR1

ABC transporter
SEED: ABC-type multidrug transport system, permease component
KEGG: ribosome-dependent ATPase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Lactate (C) -0.4 -2.5 compare
carbon source L-Glutamine (C) -0.4 -2.1 compare
carbon source D-Lactate (C) -0.3 -1.5 compare
carbon source D-Mannose (C) -0.3 -1.8 compare
stress Sisomicin 0.125 mg/ml -0.3 -1.1 compare
carbon source D-Galactose (C) -0.3 -1.6 compare
carbon source D,L-Lactate (C) -0.3 -2.0 compare
stress Lomefloxacin 0.012 mM -0.3 -1.2 compare
carbon source D-Galactose (C) -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.8 compare
stress Chloride stress +0.3 +2.2 compare
nitrogen source nitrate (N); low aeration +0.3 +1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.3 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.1 compare
control NoPredeControl +0.5 +2.4 compare