Fitness data for HSERO_RS09085 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -1.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.3 compare
nutrient casaminos -1.0 -1.7 compare
micoeukaryotes C.elegans, mixed culture-2 -0.9 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.1 compare
carbon source pyruvate (C) +0.9 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +1.8 compare
carbon source L-Asparagine (C) +1.0 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +1.9 compare
carbon source Glycerol (C) +1.0 +1.7 compare
stress Sisomicin 0.125 mg/ml +1.1 +1.7 compare
carbon source succinate (C) +1.1 +1.8 compare
carbon source D-Galacturonic Acid (C) +1.1 +1.9 compare
carbon source a-Ketoglutaric (C) +1.2 +2.2 compare
carbon source pyruvate (C) +1.2 +2.2 compare
carbon source L-Fucose (C) +1.4 +2.1 compare
carbon source D-Gluconic Acid (C) +1.6 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.4 +5.2 compare