Fitness data for HSERO_RS08960 in Herbaspirillum seropedicae SmR1

2-hydroxyacid dehydrogenase
SEED: G:T/U mismatch-specific uracil/thymine DNA-glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.2 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -1.6 compare
carbon source L-Fucose (C) -0.9 -1.5 compare
stress Cisplatin 0.003 mg/ml -0.9 -1.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.9 -3.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.8 -1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.8 -1.8 compare
micoeukaryotes C.elegans, mixed culture-2 -0.8 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -1.6 compare
carbon source L-Lactate (C) -0.7 -1.4 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.7 +1.9 compare
stress Lomefloxacin 0.012 mM +0.8 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +2.8 compare