Fitness data for HSERO_RS08955 in Herbaspirillum seropedicae SmR1

methionine ABC transporter substrate-binding protein
SEED: Methionine ABC transporter substrate-binding protein
KEGG: D-methionine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.7 compare
stress Nickel (II) chloride 0.6 mM -0.8 -3.0 compare
control NoPredeControl -0.8 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.6 compare
carbon source L-Fucose (C) -0.7 -0.9 compare
stress Fusidic 0.025 mg/ml -0.6 -1.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
carbon source D-Lactate (C) +0.6 +1.7 compare
carbon source D-Galacturonic Acid (C) +0.6 +1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +1.2 compare
carbon source L-Malic (C) +0.7 +1.3 compare
carbon source L-Proline (C) +0.7 +2.5 compare
carbon source L-Lactate (C) +0.7 +1.4 compare
carbon source D-Sorbitol (C) +0.7 +2.0 compare
stress sodium fluoride 100 mM +0.8 +1.2 compare
carbon source pyruvate (C) +0.8 +2.2 compare
carbon source D-Ribose (C) +1.1 +2.2 compare