Fitness data for HSERO_RS08925 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter ATPase
SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.8 -2.9 compare
carbon source D,L-Lactate (C) -0.8 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.9 compare
carbon source D,L-Lactate (C) -0.7 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.6 -2.1 compare
carbon source L-Lactate (C) -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.2 compare
carbon source D-Glucose (C) -0.6 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.2 compare
vitamin With vitamins t2 -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.2 compare
stress sodium fluoride 100 mM +0.6 +1.8 compare
carbon source D-Galactose (C) +0.6 +1.4 compare
carbon source D-Ribose (C) +0.6 +1.5 compare
carbon source Xylitol (C) +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +1.3 compare