Fitness data for HSERO_RS08720 in Herbaspirillum seropedicae SmR1

amino acid deaminase
SEED: D-serine deaminase (EC 4.3.1.18)
KEGG: D-serine dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
vitamin With vitamins t2 -0.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.4 compare
stress nitrite 20 mM +0.5 +1.3 compare
carbon source L-Arabinose (C) +0.5 +1.7 compare
carbon source D,L-Malic Acid (C) +0.5 +1.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.5 +1.4 compare
plant Control soil assay; outgrowth in LB +0.6 +1.8 compare
carbon source D-Glucose (C) +0.6 +1.9 compare
carbon source D-Glucose (C) +0.6 +1.6 compare
carbon source D-Glucose (C) +0.7 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.7 +1.6 compare
micoeukaryotes C.elegans, mixed culture-1 +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.3 compare