Fitness data for HSERO_RS08715 in Herbaspirillum seropedicae SmR1

2-dehydro-3-deoxygluconokinase
SEED: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
KEGG: 2-dehydro-3-deoxygluconokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.5 -1.7 compare
carbon source D-Glucose (C) -0.5 -1.0 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.5 -2.0 compare
carbon source D-Ribose (C) -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
carbon source D-Galactose (C) -0.4 -2.1 compare
carbon source a-Ketoglutaric (C) +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.4 +2.1 compare
carbon source L-Malic (C) +0.4 +1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +2.0 compare
carbon source L-Lactate (C) +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.0 compare