Fitness data for HSERO_RS08700 in Herbaspirillum seropedicae SmR1

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source D-Glucose (C) -2.3 -1.3 compare
carbon source D-Glucose (C) -2.1 -1.3 compare
carbon source D,L-Lactate (C) -1.9 -1.7 compare
carbon source L-Fucose (C) -1.7 -1.3 compare
carbon source L-Arabinose (C) -1.6 -1.1 compare
carbon source D-Ribose (C) -1.6 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -1.4 compare
stress Lomefloxacin 0.012 mM -1.5 -0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -1.1 compare
stress A22 0.02 mg/ml -1.1 -1.1 compare
nutrient Min media with glucose -1.0 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +1.0 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +1.2 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.2 +1.7 compare
control NoPredeControl +1.5 +2.1 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +2.8 +7.1 compare