Fitness data for HSERO_RS08510 in Herbaspirillum seropedicae SmR1

phosphodiesterase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.6 compare
stress Sisomicin 0.125 mg/ml -0.4 -1.4 compare
control NoPredeControl -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
carbon source D-Lactate (C) +0.4 +2.0 compare
nutrient L-Histidine +0.4 +2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
carbon source pyruvate (C) +0.4 +2.4 compare
carbon source D-Galactose (C) +0.4 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +0.9 compare
carbon source L-Fucose (C) +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.0 compare
carbon source Xylitol (C) +0.5 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare