Fitness data for HSERO_RS08470 in Herbaspirillum seropedicae SmR1

chemotaxis protein
SEED: Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
KEGG: chemotaxis protein methyltransferase CheR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.1 compare
carbon source Xylitol (C) -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 compare
carbon source L-Rhamnose (C) -0.4 -1.3 compare
carbon source L-Fucose (C) +0.4 +1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.4 +2.5 compare
carbon source D,L-Lactate (C) +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.8 compare
carbon source Carbon source D-Glucose 20 mM +0.5 +2.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.5 +2.0 compare
carbon source L-Fucose (C) +0.5 +1.5 compare
control NoPredeControl +0.6 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +0.9 compare