Fitness data for HSERO_RS08385 in Herbaspirillum seropedicae SmR1

anaerobic (selenocysteine-containing) formate dehydrogenase
SEED: Putative formate dehydrogenase oxidoreductase protein
KEGG: formate dehydrogenase, alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -3.0 compare
carbon source D-Glucose (C) -0.7 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -3.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.9 compare
carbon source L-Rhamnose (C) -0.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
carbon source L-Arabinose (C) -0.5 -2.0 compare
carbon source Xylitol (C) -0.5 -2.0 compare
carbon source L-Fucose (C) -0.4 -2.1 compare
carbon source m-Inositol (C) -0.4 -1.7 compare
carbon source pyruvate (C) -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +1.7 compare
carbon source D,L-Lactate (C) +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.2 compare
stress Cobalt chloride 0.2 mM +1.2 +5.5 compare