Fitness data for HSERO_RS08195 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -0.7 -2.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.5 -3.4 compare
carbon source L-Arabinose (C) -0.5 -2.4 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.4 -2.7 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.3 -1.9 compare
micoeukaryotes C.elegans, mixed culture-1 -0.3 -1.8 compare
carbon source D-Ribose (C) -0.3 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.6 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -2.1 compare
carbon source L-Glutamine (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.5 compare
carbon source Glycerol (C) +0.4 +1.5 compare
plant Control soil assay; outgrowth in LB +0.4 +2.2 compare
stress Dimethyl Sulfoxide 5 vol% +0.4 +1.5 compare
nitrogen source nitrate (N); low aeration +0.5 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.9 compare