Fitness data for HSERO_RS08020 in Herbaspirillum seropedicae SmR1

heavy metal translocating P-type ATPase
SEED: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
KEGG: Cu2+-exporting ATPase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -1.7 -7.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.3 -5.0 compare
plant Control soil assay; outgrowth in LB -1.1 -4.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.0 -3.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -3.9 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.0 -5.4 compare
plant Control soil assay; outgrowth in LB -1.0 -3.2 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.9 -5.7 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.9 -4.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -4.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -4.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.7 -4.4 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -4.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.6 -4.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -3.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -4.6 compare
carbon source L-Fucose (C) -0.6 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.9 compare
carbon source D-Ribose (C) -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +0.9 compare