Fitness data for HSERO_RS07985 in Herbaspirillum seropedicae SmR1

copper oxidase
SEED: Multicopper oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.8 -4.0 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -3.1 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.4 -2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -1.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.4 -1.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -2.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.3 -2.0 compare
carbon source L-Malic (C) +0.3 +2.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.6 compare
control NoPredeControl +0.4 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.4 compare
stress sodium fluoride 100 mM +0.4 +1.7 compare
carbon source D-Glucose (C) +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.7 compare
carbon source L-Arabinose (C) +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.3 compare