Fitness data for HSERO_RS07895 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Xylitol (C) -0.6 -2.5 compare
stress Fusidic 0.025 mg/ml -0.6 -2.6 compare
carbon source L-Rhamnose (C) -0.6 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -3.1 compare
carbon source D-Galactose (C) -0.4 -2.1 compare
control NoPredeControl -0.4 -1.5 compare
micoeukaryotes C.elegans, mixed culture-1 -0.4 -2.1 compare
carbon source Glycerol (C) -0.4 -2.1 compare
carbon source D-Gluconic Acid (C) -0.4 -1.8 compare
carbon source D-Gluconic Acid (C) -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.1 compare
stress Nickel (II) chloride 0.6 mM -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.5 compare