Fitness data for HSERO_RS07865 in Herbaspirillum seropedicae SmR1

FAD-dependent oxidoreductase
SEED: Nucleoside-diphosphate-sugar epimerases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.3 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.6 compare
plant Control soil assay; outgrowth in LB -0.3 -1.4 compare
carbon source D-Glucose (C) +0.3 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.4 +2.0 compare
carbon source L-Arabinose (C) +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +2.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.6 compare