Fitness data for HSERO_RS07810 in Herbaspirillum seropedicae SmR1

FAD-dependent oxidoreductase
SEED: Salicylate hydroxylase (EC 1.14.13.1)
KEGG: 3-(3-hydroxy-phenyl)propionate hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.6 compare
carbon source D-Galactose (C) -0.3 -0.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
carbon source D-Galacturonic Acid (C) -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.4 compare
carbon source D,L-Malic Acid (C) +0.3 +1.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +1.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.3 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.9 compare
vitamin No vitamins t2 +0.4 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
carbon source Carbon source D-Glucose 20 mM +0.4 +2.5 compare
stress Sisomicin 0.125 mg/ml +0.4 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.1 compare