Fitness data for HSERO_RS07700 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.1 -2.0 compare
control NoPredeControl -1.0 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.0 -2.9 compare
micoeukaryotes C.elegans, mixed culture-1 -0.9 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.2 compare
carbon source D-Galactose (C) -0.8 -1.8 compare
carbon source D-Gluconic Acid (C) -0.7 -1.9 compare
carbon source D-Gluconic Acid (C) -0.7 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.3 compare
plant Control soil assay; outgrowth in LB -0.6 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.5 compare
carbon source D-Mannose (C) -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -1.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.7 +2.5 compare
stress Cisplatin 0.003 mg/ml +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +2.4 compare
stress Sisomicin 0.125 mg/ml +0.9 +2.2 compare
stress sodium fluoride 100 mM +1.0 +2.1 compare