Fitness data for HSERO_RS07695 in Herbaspirillum seropedicae SmR1

ABC transporter permease
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.9 -1.8 compare
stress sodium fluoride 100 mM -0.7 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.3 compare
carbon source L-Fucose (C) -0.7 -2.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -1.5 compare
plant Control soil assay; outgrowth in LB -0.6 -1.3 compare
carbon source D-Mannose (C) -0.6 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.9 compare
carbon source D-Mannose (C) -0.5 -1.7 compare
nitrogen source nitrate (N); low aeration -0.5 -2.8 compare
carbon source L-Fucose (C) -0.5 -1.4 compare
stress Lomefloxacin 0.012 mM +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.6 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.0 compare
r2a control R2A control +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.6 +1.4 compare