Fitness data for HSERO_RS07610 in Herbaspirillum seropedicae SmR1

fumarate hydratase
SEED: Fumarate hydratase class II (EC 4.2.1.2)
KEGG: fumarate hydratase, class II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Lactate (C) -0.7 -2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.9 compare
carbon source L-Malic (C) -0.5 -2.6 compare
carbon source Xylitol (C) -0.5 -2.0 compare
carbon source D-Ribose (C) -0.5 -1.8 compare
plant Control soil assay; outgrowth in LB -0.4 -1.3 compare
carbon source D-Ribose (C) -0.4 -1.8 compare
carbon source L-Glutamine (C) -0.4 -1.7 compare
carbon source D-Galactose (C) -0.4 -1.9 compare
carbon source D-Gluconic Acid (C) -0.4 -1.4 compare
nitrogen source nitrate (N); high aeration +0.4 +1.7 compare
vitamin No vitamins t1 +0.4 +2.0 compare
nitrogen source Ammonium chloride (N); high aeration +0.4 +2.2 compare
carbon source D-Mannitol (C) +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.6 compare
control NoPredeControl +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.8 compare