Fitness data for HSERO_RS07520 in Herbaspirillum seropedicae SmR1

LacI family transcriptional regulator
SEED: ABC transporter, substrate binding protein [amino acid]
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Fucose (C) -0.5 -2.1 compare
carbon source L-Rhamnose (C) -0.4 -1.7 compare
stress Sisomicin 0.125 mg/ml -0.4 -1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.6 compare
vitamin No vitamins t1 -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -1.8 compare
carbon source D-Gluconic Acid (C) -0.4 -1.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.3 -2.3 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
micoeukaryotes C.elegans, mixed culture-2 +0.3 +1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.7 compare
nutrient L-Histidine +0.3 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare