Fitness data for HSERO_RS07475 in Herbaspirillum seropedicae SmR1

nitrate ABC transporter permease
KEGG: sulfonate/nitrate/taurine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.6 compare
plant Control soil assay; outgrowth in LB -0.4 -1.3 compare
carbon source D-Lactate (C) +0.4 +1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.7 compare
carbon source D-Xylose (C) +0.4 +1.4 compare
carbon source D-Ribose (C) +0.4 +1.7 compare
carbon source L-Arabinose (C) +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.5 compare
stress nitrate 200 mM +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.8 compare
carbon source D-Lactate (C) +0.4 +1.9 compare
stress A22 0.02 mg/ml +0.4 +2.1 compare
carbon source Xylitol (C) +0.5 +2.2 compare
carbon source L-Arabinose (C) +0.5 +1.8 compare
carbon source pyruvate (C) +0.5 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare