Fitness data for HSERO_RS07465 in Herbaspirillum seropedicae SmR1

alpha/beta hydrolase
SEED: 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
vitamin With vitamins t1 -1.0 -3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -1.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.7 -1.4 compare
control NoPredeControl +0.6 +2.3 compare
r2a control R2A control +0.6 +3.1 compare
carbon source L-Rhamnose (C) +0.6 +1.9 compare
carbon source D-Ribose (C) +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.6 compare
carbon source D-Glucose (C) +0.7 +1.1 compare
carbon source L-Fucose (C) +0.8 +1.7 compare
carbon source pyruvate (C) +0.8 +1.9 compare
carbon source D-Galactose (C) +0.8 +1.6 compare
carbon source m-Inositol (C) +0.8 +1.7 compare
carbon source D-Glucose-6-Phosphate (C) +0.8 +1.9 compare
carbon source D-Xylose (C) +0.8 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.8 compare
carbon source D-Gluconic Acid (C) +0.9 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.8 compare
carbon source L-Fucose (C) +1.3 +4.2 compare