Fitness data for HSERO_RS07420 in Herbaspirillum seropedicae SmR1

formate dehydrogenase subunit gamma
SEED: NAD-dependent formate dehydrogenase gamma subunit
KEGG: formate dehydrogenase, gamma subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -2.8 compare
carbon source Xylitol (C) -0.6 -2.2 compare
stress Sisomicin 0.125 mg/ml -0.6 -2.0 compare
stress A22 0.02 mg/ml -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.4 compare
carbon source D-Mannose (C) -0.4 -1.3 compare
stress Chloride stress -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4 +1.4 compare
carbon source D-Xylose (C) +0.4 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.5 +1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
carbon source m-Inositol (C) +0.6 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +1.1 compare