Fitness data for HSERO_RS07405 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Glucose (C) -0.9 -3.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.6 compare
carbon source D-Galactose (C) -0.6 -2.6 compare
carbon source L-Glutamine (C) -0.6 -1.8 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
carbon source D-Gluconic Acid (C) -0.6 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
carbon source D-Ribose (C) -0.5 -1.9 compare
carbon source L-Rhamnose (C) -0.5 -2.1 compare
carbon source D-Lactate (C) -0.5 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.4 compare
carbon source D-Galactose (C) -0.4 -1.1 compare
carbon source a-Ketoglutaric (C) -0.4 -2.2 compare
carbon source D-Xylose (C) -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.8 compare