Fitness data for HSERO_RS07265 in Herbaspirillum seropedicae SmR1

aspartyl/asparaginyl beta-hydroxylase AspH
SEED: Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
KEGG: beta-hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -1.4 -3.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -4.7 compare
stress A22 0.04 mg/ml -0.8 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -3.6 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.5 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -3.2 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -3.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -3.8 compare
carbon source succinate (C) -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.8 compare
stress Cobalt chloride 0.2 mM +0.8 +3.8 compare