Fitness data for HSERO_RS07235 in Herbaspirillum seropedicae SmR1

aldehyde dehydrogenase
SEED: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
KEGG: succinate-semialdehyde dehydrogenase (NADP+)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.7 -3.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -2.3 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -2.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.6 -2.2 compare
plant Control soil assay; outgrowth in LB -0.5 -1.8 compare
carbon source D-Lactate (C) -0.5 -2.4 compare
carbon source D-Galacturonic Acid (C) -0.5 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.2 compare
carbon source D-Ribose (C) -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.1 compare
carbon source Carbon source Phenylacetic 5 mM -0.4 -1.9 compare
carbon source D-Gluconic Acid (C) -0.4 -1.7 compare
carbon source m-Inositol (C) -0.4 -2.0 compare
stress nitrate 200 mM -0.4 -1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +1.9 compare
plant Control soil assay; outgrowth in LB +0.4 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.9 compare