Fitness data for HSERO_RS07155 in Herbaspirillum seropedicae SmR1

peptidase C69
SEED: TldD protein, part of TldE/TldD proteolytic complex
KEGG: TldD protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.9 -5.1 compare
carbon source D-Mannose (C) -1.4 -3.7 compare
stress nitrate 200 mM -1.3 -3.4 compare
carbon source D-Mannose (C) -1.2 -3.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.2 -4.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.1 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.9 compare
stress sodium fluoride 100 mM -1.0 -2.4 compare
carbon source m-Inositol (C) -1.0 -3.0 compare
carbon source D-Ribose (C) -1.0 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.1 compare
carbon source D-Galactose (C) -0.9 -2.3 compare
stress Cisplatin 0.003 mg/ml -0.9 -3.3 compare
carbon source D-Glucose (C) -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.9 +4.3 compare