Fitness data for HSERO_RS07105 in Herbaspirillum seropedicae SmR1

allophanate hydrolase
SEED: Allophanate hydrolase (EC 3.5.1.54)
KEGG: allophanate hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress nitrate 200 mM -0.5 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.2 compare
nitrogen source L-Glutamic (N); high aeration -0.4 -2.7 compare
plant Control soil assay; outgrowth in LB -0.4 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.7 compare
nitrogen source L-Glutamic (N); low aeration -0.3 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.2 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -2.0 compare
carbon source Carbon source D-Glucose 20 mM -0.3 -1.9 compare
stress Sisomicin 0.125 mg/ml -0.3 -1.2 compare
nitrogen source Ammonium chloride (N); low aeration -0.3 -1.9 compare
carbon source D,L-Lactate (C) -0.3 -1.8 compare
carbon source Glycerol (C) -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.9 compare
carbon source L-Rhamnose (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.3 compare
carbon source D-Xylose (C) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.1 compare