Fitness data for HSERO_RS07090 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -2.3 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.9 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.1 compare
carbon source m-Inositol (C) -0.7 -1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.6 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6 -1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -1.6 compare
carbon source D-Galactose (C) +0.6 +2.0 compare
carbon source L-Arabinose (C) +0.6 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.0 compare
stress sodium fluoride 100 mM +0.6 +2.2 compare
stress Lomefloxacin 0.012 mM +0.7 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +3.6 compare
carbon source L-Glutamine (C) +0.7 +2.8 compare
carbon source L-Lactate (C) +0.8 +3.9 compare
carbon source D-Galactose (C) +0.9 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.3 compare
carbon source D-Xylose (C) +1.2 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.6 +1.3 compare