Fitness data for HSERO_RS07085 in Herbaspirillum seropedicae SmR1

cysteine hydrolase
SEED: Isochorismatase (EC 3.3.2.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
stress A22 0.02 mg/ml -0.7 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.4 compare
stress nitrite 20 mM -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +1.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.9 compare
nitrogen source Ammonium chloride (N); high aeration +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.1 compare
nitrogen source nitrate (N); low aeration +0.5 +2.8 compare
carbon source D-Lactate (C) +0.5 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.7 compare