Fitness data for HSERO_RS07025 in Herbaspirillum seropedicae SmR1

ATP-dependent Clp protease ClpS
SEED: ATP-dependent Clp protease adaptor protein ClpS
KEGG: ATP-dependent Clp protease adaptor protein ClpS

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.6 -3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.3 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -2.0 -3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.0 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.6 -2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.6 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -2.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.4 -2.3 compare
nutrient Min media with glucose -1.4 -3.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -1.3 -1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.3 -1.9 compare
stress sodium fluoride 100 mM -1.3 -1.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -1.2 -3.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.2 -2.6 compare
carbon source D-Gluconic Acid (C) +1.5 +3.7 compare
carbon source D,L-Lactate (C) +1.6 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.9 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +3.0 +6.3 compare