Fitness data for HSERO_RS06825 in Herbaspirillum seropedicae SmR1

transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.9 compare
carbon source L-Rhamnose (C) -0.8 -1.6 compare
stress Lomefloxacin 0.012 mM -0.8 -1.6 compare
carbon source pyruvate (C) -0.7 -4.0 compare
carbon source L-Arabinose (C) -0.6 -2.4 compare
stress Sisomicin 0.125 mg/ml -0.6 -1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.1 compare
plant Control soil assay; outgrowth in LB -0.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
carbon source D-Galacturonic Acid (C) -0.5 -2.4 compare
stress Chloride stress +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.4 compare
nitrogen source nitrate (N); high aeration +0.5 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.6 compare
carbon source L-Rhamnose (C) +0.6 +2.8 compare
nitrogen source L-Glutamic (N); high aeration +0.6 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.6 compare
carbon source L-Rhamnose (C) +0.7 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +0.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +1.6 compare