Fitness data for HSERO_RS06810 in Herbaspirillum seropedicae SmR1

hemolysin D
SEED: RND efflux system, membrane fusion protein CmeA
KEGG: membrane fusion protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Galactose (C) -0.4 -1.9 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.4 -1.5 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -1.6 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.9 compare
stress Sisomicin 0.125 mg/ml -0.3 -1.4 compare
stress Lomefloxacin 0.012 mM -0.3 -1.4 compare
plant Control soil assay; outgrowth in LB -0.3 -1.5 compare
vitamin No vitamins t1 +0.3 +1.5 compare
carbon source L-Lactate (C) +0.3 +1.7 compare
carbon source L-Fucose (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.3 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.6 compare
carbon source L-Fucose (C) +0.3 +2.0 compare
carbon source Glycerol (C) +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.1 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +2.3 compare