Fitness data for HSERO_RS06775 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.5 -2.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.5 compare
carbon source D-Mannitol (C) +0.4 +1.9 compare
nitrogen source L-Glutamic (N); high aeration +0.4 +2.0 compare
carbon source Xylitol (C) +0.4 +2.0 compare
carbon source L-Arabinose (C) +0.4 +1.5 compare
nutrient Min media with glucose +0.4 +2.1 compare
carbon source L-mannose (C) +0.4 +1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +0.8 compare
carbon source L-Malic (C) +0.4 +2.2 compare
carbon source D-Xylose (C) +0.4 +1.6 compare
carbon source Glycerol (C) +0.4 +2.0 compare
carbon source D-Ribose (C) +0.5 +1.7 compare
nitrogen source nitrate (N); low aeration +0.5 +1.5 compare
carbon source D-Galactose (C) +0.5 +2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.8 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +1.7 compare