Fitness data for HSERO_RS06770 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)

group	condition	fitness	t score
control	NoPredeControl	-0.5	-2.0	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	-2.0	compare
supernatant control	Vogels_fungal_media 0.1X	+0.4	+1.8	compare
carbon source	Glycerol (C)	+0.4	+2.4	compare
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.4	+1.7	compare
stress	Fusidic 0.025 mg/ml	+0.5	+1.5	compare
carbon source	D-Glucose (C)	+0.5	+1.4	compare
stress	nitrate 200 mM	+0.5	+1.6	compare
carbon source	D-Mannose (C)	+0.5	+2.5	compare
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	+0.5	+2.0	compare
carbon source	a-Ketoglutaric (C)	+0.5	+2.1	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5	+0.9	compare
carbon source	L-Rhamnose (C)	+0.5	+2.1	compare
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.6	+2.3	compare
carbon source	L-Asparagine (C)	+0.6	+2.2	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	+2.8	compare
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.6	+1.3	compare
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.7	+3.0	compare
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7	+1.5	compare
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.0	+1.2	compare