Fitness data for HSERO_RS06735 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR-type transcriptional regulator NahR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.8 compare
carbon source D-Sorbitol (C) -0.7 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.5 compare
carbon source D-Galactose (C) -0.6 -1.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.6 -1.4 compare
carbon source L-Lactate (C) -0.6 -1.8 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.5 -1.4 compare
carbon source D-Xylose (C) -0.5 -1.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.5 -2.0 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.5 -1.1 compare
carbon source L-Proline (C) +0.5 +1.9 compare
nitrogen source Ammonium chloride (N); high aeration +0.5 +2.7 compare
carbon source L-mannose (C) +0.6 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.6 compare
stress Lomefloxacin 0.012 mM +0.6 +1.7 compare
stress Sisomicin 0.125 mg/ml +0.6 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.1 compare
control NoPredeControl +0.8 +1.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.9 +1.8 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +1.0 +2.6 compare